Cite this strain

"Desulfomicrobium aggregans" (DSM 113299, JCM 39179, CaP3V-S-L1A)

BacDive ID 174610

Type strain

Strain Designation CaP3V-S-L1A

Culture col. no. DSM 113299 JCM 39179 CaP3V-S-L1A

NCBI tax ID(s) 3043139

Links

"Desulfomicrobium aggregans" CaP3V-S-L1A is a prokaryote that was isolated from oil well.

Name and taxonomic classification

SI-ID 281956

DSM 113299,JCM 39179

@ref 20215

Last LPSN update 2025-12-16 10:11:51

Domain Pseudomonadati

Phylum Thermodesulfobacteriota

Class Desulfovibrionia

Order Desulfovibrionales

Family Desulfomicrobiaceae

Genus Desulfomicrobium

Species "Desulfomicrobium aggregans"

Full scientific name Desulfomicrobium aggregans Dengler et al. 2023

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
124337	DESULFOVIBRIO (MV) MEDIUM (DSMZ Medium 641)		Medium recipe at MediaDive	Name: DESULFOVIBRIO (MV) MEDIUM (DSMZ Medium 641) Composition: Na-DL-lactate 2.49252 g/l Na2SO4 1.99402 g/l NH4Cl 0.997009 g/l Yeast extract 0.997009 g/l Na2CO3 0.997009 g/l MgSO4 x 7 H2O 0.997009 g/l Na2S2O3 x 5 H2O 0.997009 g/l KH2PO4 0.498504 g/l Na2S x 9 H2O 0.0997009 g/l CaCl2 x 2 H2O 0.0997009 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l NaOH 0.000498504 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l Pyridoxine hydrochloride 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l Riboflavin 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Biotin 1.99402e-05 g/l Folic acid 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
124337	positive	growth	37

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
124337	oil well	Talamanca, Cahuita National Park	Costa Rica	CRI	Middle and South America	9.7358	-82.8257 9.7358/-82.8257

Interaction and safety

Sequence information

Genome-based predictions

Literature

Title	Authors	Journal	DOI	Year
A novel interdomain consortium from a Costa Rican oil well composed of Methanobacterium cahuitense sp. nov. and Desulfomicrobium aggregans sp. nov.	Dengler L, Meier J, Klingl A, Nissl L, Bellack A, Grohmann D, Rachel R, Huber H.	Arch Microbiol	10.1007/s00203-023-03533-9	2023

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#124337	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 113299
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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"Desulfomicrobium aggregans" (DSM 113299, JCM 39179, CaP3V-S-L1A)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome-based predictions

Literature

Literature

References

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