Cite this strain

Haliangium tepidum (DSM 14436, JCM 11304, AJ 13914)

Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 5870

Type strain

Strain Designation SMP-10

Culture col. no. DSM 14436 JCM 11304 AJ 13914 SMP-10 CIP 107737

NCBI tax ID(s) 162028

Special Collections DSMZ JCM CIP

Links

Name and taxonomic classification

Haliangium tepidum SMP-10 is a mesophilic bacterium that was isolated from coastal sands.

mesophilic 16S sequence Bacteria

SI-ID 100668

DSM 14436, JCM 11304, CIP 107737

Last LPSN update 2024-12-09 10:43:46

Domain Bacteria

Phylum Pseudomonadota

Class Deltaproteobacteria

Order Myxococcales

Family Kofleriaceae

Genus Haliangium

Species Haliangium tepidum

Full scientific name Haliangium tepidum Fudou et al. 2002

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
5352	VY/4-SWS AGAR (DSMZ Medium 958)		Medium recipe at MediaDive	Name: VY/4-SWS AGAR (DSMZ Medium 958) Composition: NaCl 20.0 g/l Agar 15.0 g/l MgSO4 x 7 H2O 8.0 g/l Yeast cell paste 2.5 g/l CaCl2 x 2 H2O 1.0 g/l KCl 0.5 g/l NaHCO3 0.16 g/l KBr 0.08 g/l SrCl2 x 6 H2O 0.03 g/l Sodium beta-glycerophosphate 0.01 g/l Ferric citrate 0.01 g/l Cyanocobalamine 0.0005 g/l EDTA 0.0005 g/l FeSO4 x 7 H2O 0.0002 g/l H3BO3 3e-05 g/l CoCl2 x 6 H2O 2e-05 g/l ZnSO4 x 7 H2O 1e-05 g/l Na2MoO4 x 2 H2O 3e-06 g/l MnCl2 x 4 H2O 3e-06 g/l NiCl2 x 6 H2O 2e-06 g/l CuCl2 x 2 H2O 1e-06 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
5352	positive	growth	37	mesophilic
67770	positive	growth	37	mesophilic

Physiology and metabolism

Observation

67770

Observationquinones: MK-8

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Sandy

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
5352	coastal sands	Kanagawa	Japan	JPN	Asia
67770	Sea grass sample collected from a sandy beach on the Miura Peninsula	Kanagawa	Japan	JPN	Asia

Safety information

Risk assessment

@ref	Biosafety level	Biosafety level comment
5352	1	Risk group (German classification) According to TRBA 466

Sequence information

GC content

@ref	GC-content (mol%)
5352	69
67770	69

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
5352	Haliangium tepidum gene for 16S rRNA	AB062751	1508		162028

Genome-based predictions

External links

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Haliangium ochraceum gen. nov., sp. nov. and Haliangium tepidum sp. nov.: novel moderately halophilic myxobacteria isolated from coastal saline environments.	Fudou R, Jojima Y, Iizuka T, Yamanaka S	J Gen Appl Microbiol	10.2323/jgam.48.109	2002

Straininfo Link

@ref	Straininfo	Culture collections
75350	100668	DSM 14436, JCM 11304, CIP 107737

Culture collection no.

Culture collection no.
DSM 14436
JCM 11304
AJ 13914
SMP-10
CIP 107737

References

#5352	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14436
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#75350	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID100668.1 )

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