Cite this strain

Methanococcus maripaludis (DSM 2771, ATCC 35294, Delta RC)

Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6990

Type strain

Strain Designation Delta RC

Culture col. no. DSM 2771 ATCC 35294 Delta RC

NCBI tax ID(s) 39152

Special Collections DSMZ

Links

Name and taxonomic classification

Methanococcus maripaludis Delta RC is an anaerobe, mesophilic archaeon that was isolated from mud.

anaerobe mesophilic genome sequence Archaea

SI-ID 45008

ATCC 35294, DSM 2771

Last LPSN update 2024-12-09 10:43:54

Domain Archaea

Phylum Methanobacteriota

Class Methanococci

Order Methanococcales

Family Methanococcaceae

Genus Methanococcus

Species Methanococcus maripaludis

Full scientific name Methanococcus maripaludis Jones et al. 1984

Synonyms (1)

Methanococcus deltae

BacDive ID	Other strains from **Methanococcus maripaludis** (5)	Type strain
6989	M. maripaludis JJ, DSM 2067, ATCC 43000, JCM 10722, NBRC ... (type strain)
6991	M. maripaludis LL, S2, DSM 14266, JCM 13030, NBRC 101832
160836	M. maripaludis JCM 10011, NBRC 102114, OCM 209
160837	M. maripaludis JCM 10012, OCM 363
160838	M. maripaludis JCM 10013, OCM 364

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	99.3

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link
1217	METHANOCOCCUS MARIPALUDIS MEDIUM (DSMZ Medium 288)		Medium recipe provided by DSMZ

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
1217	positive	growth	37	mesophilic

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		96

Oxygen tolerance

1217

Oxygen toleranceanaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Mud (Sludge)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
1217	mud	Gulf of Mexico, East Bay, Mississippi River delta	Mexico	MEX	North America

Safety information

Risk assessment

@ref	Biosafety level	Biosafety level comment
1217	1	Risk group (German classification) According to TRBA 466

Sequence information

GC content

1217

GC-content (mol%)40.5

Genome sequences

@ref	Description	Accession	Assembly level	Database	NCBI tax ID
66792	Methanococcus maripaludis DSM 2771	GCA_017875815	contig		39152
66792	Methanococcus deltae DSM 2771	2913333627	draft	JGI IMG/M	39152

Genome-based predictions

Predictions

Predictions from Diaspora project based on:
Methanococcus maripaludis DSM 2771
NCBI: GCA_017875815

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	96.00	no
125439	motility	BacteriaNetⓘ	no	77.60	no
125439	gram_stain	BacteriaNetⓘ	negative	99.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	88.00	no

External links

Straininfo Link

@ref	Straininfo	Culture collections
76451	45008	ATCC 35294, DSM 2771

Culture collection no.

Culture collection no.
DSM 2771
ATCC 35294
Delta RC

References

#1217	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2771
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#76451	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID45008.1 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

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